Protein–RNA interactions for Protein: Q5SZB4

C9orf50, Uncharacterized protein C9orf50, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf50Q5SZB4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 FAM86MP-201ENST00000340703 885 ntBASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 DFFBP1-201ENST00000433250 979 ntBASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf50Q5SZB4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
C9orf50Q5SZB4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
C9orf50Q5SZB4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
C9orf50Q5SZB4 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 AC011495.1-201ENST00000498085 584 ntBASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 AC119751.2-201ENST00000504529 210 ntBASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.26■□□□□ 0.51
C9orf50Q5SZB4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 RPL37AP1-201ENST00000412502 279 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 FAM8A2P-201ENST00000528813 1142 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AC135586.1-201ENST00000539323 574 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AL512343.1-201ENST00000605837 169 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AC004790.1-201ENST00000612686 536 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AP000997.3-201ENST00000623333 2250 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 AL353732.1-201ENST00000569618 1459 ntBASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
C9orf50Q5SZB4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 AL133338.1-201ENST00000565695 1517 ntBASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
C9orf50Q5SZB4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms