Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
SNAPC4Q5SXM2 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 AC135776.1-201ENST00000319817 2481 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 GNAQP1-201ENST00000444815 1067 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 RN7SL752P-201ENST00000463779 287 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 RAB43P1-201ENST00000561790 589 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 MIR4259-201ENST00000584466 101 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 SPTSSB-204ENST00000617024 1292 ntBASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC27.79■■■□□ 2.04
SNAPC4Q5SXM2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 RPL37AP1-201ENST00000412502 279 ntBASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 SPDYE18-201ENST00000510091 1050 ntBASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 APOC4-201ENST00000591600 348 ntTSL 3 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 AC007431.3-201ENST00000623221 587 ntBASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
SNAPC4Q5SXM2 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 ZNF890P-202ENST00000530367 1156 ntBASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 SNX29P1-201ENST00000548357 1007 ntBASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 STX3-203ENST00000529177 1571 ntTSL 2 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC27.77■■■□□ 2.04
SNAPC4Q5SXM2 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 RN7SL837P-201ENST00000463010 287 ntBASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 AC091167.2-201ENST00000579581 588 ntBASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC27.76■■■□□ 2.04
SNAPC4Q5SXM2 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 KRT18P55-202ENST00000578578 1546 ntBASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 CENPM-206ENST00000407253 818 ntTSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 CHCHD2P3-201ENST00000603038 451 ntBASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC27.76■■■□□ 2.03
SNAPC4Q5SXM2 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 CETN4P-206ENST00000642099 2168 ntBASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
SNAPC4Q5SXM2 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms