Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CBWD3Q5JTY5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CBWD3Q5JTY5 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CBWD3Q5JTY5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 AC099398.1-201ENST00000567919 2776 ntBASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 SAPCD2P3-201ENST00000455031 850 ntBASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 AL022326.1-202ENST00000641533 845 ntBASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 GPR89P-201ENST00000407924 1495 ntBASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CBWD3Q5JTY5 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 AC124947.2-201ENST00000547118 1133 ntBASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CBWD3Q5JTY5 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CBWD3Q5JTY5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.61■□□□□ 0.57
CBWD3Q5JTY5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CBWD3Q5JTY5 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC18.61■□□□□ 0.57
CBWD3Q5JTY5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CBWD3Q5JTY5 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms