Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.11■□□□□ 0.81
CERKLQ49MI3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CERKLQ49MI3 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 NMU-203ENST00000507338 658 ntTSL 3 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 RPS15-207ENST00000591032 550 ntTSL 3 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CERKLQ49MI3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CERKLQ49MI3 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.09■□□□□ 0.81
CERKLQ49MI3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CERKLQ49MI3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 AP000344.2-201ENST00000512987 629 ntBASIC20.08■□□□□ 0.81
CERKLQ49MI3 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 AC112191.1-201ENST00000523689 701 ntBASIC20.08■□□□□ 0.81
CERKLQ49MI3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CERKLQ49MI3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.08■□□□□ 0.81
CERKLQ49MI3 AL355385.1-201ENST00000606123 409 ntBASIC20.08■□□□□ 0.81
CERKLQ49MI3 REXO1L3P-201ENST00000622202 1288 ntBASIC20.08■□□□□ 0.81
CERKLQ49MI3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CERKLQ49MI3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.08■□□□□ 0.8
CERKLQ49MI3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CERKLQ49MI3 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CERKLQ49MI3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.08■□□□□ 0.8
CERKLQ49MI3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CERKLQ49MI3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CERKLQ49MI3 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CERKLQ49MI3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CERKLQ49MI3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CERKLQ49MI3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CERKLQ49MI3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms