Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 MIR4538-201ENST00000581377 78 ntBASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SPDYE12P-201ENST00000618416 771 ntBASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 GPR182-203ENST00000622922 591 ntBASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RSPO4Q2I0M5 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 AC092933.1-201ENST00000393644 945 ntBASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ACTG1P4-201ENST00000425123 1122 ntBASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 MIR4259-201ENST00000584466 101 ntBASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 MIR6787-201ENST00000616675 61 ntBASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.6■□□□□ 0.25
RSPO4Q2I0M5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 AC020763.4-201ENST00000623414 4170 ntBASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 AL138828.2-201ENST00000615812 383 ntBASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 AC005082.1-201ENST00000413042 2259 ntBASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 BX323043.1-201ENST00000641006 1765 ntBASIC16.59■□□□□ 0.25
RSPO4Q2I0M5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RSPO4Q2I0M5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms