Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PDS5AQ29RF7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 PMS2P2-201ENST00000425039 1128 ntBASIC20.54■□□□□ 0.88
PDS5AQ29RF7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 AC124947.2-201ENST00000547118 1133 ntBASIC20.54■□□□□ 0.88
PDS5AQ29RF7 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 AC026471.1-201ENST00000564629 3026 ntBASIC20.54■□□□□ 0.88
PDS5AQ29RF7 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
PDS5AQ29RF7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 HMGA1P7-201ENST00000406908 502 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AL355306.1-201ENST00000415580 579 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC109635.5-201ENST00000533593 962 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 SNHG9-202ENST00000564014 471 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 MIR3909-201ENST00000579518 119 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 AC105339.1-204ENST00000636249 355 ntBASIC20.53■□□□□ 0.88
PDS5AQ29RF7 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PDS5AQ29RF7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms