Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDK3Q00526 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 SLC25A1P3-201ENST00000395415 828 ntBASIC16.94■□□□□ 0.3
CDK3Q00526 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 BX842568.4-201ENST00000421222 227 ntBASIC16.94■□□□□ 0.3
CDK3Q00526 AC087163.2-201ENST00000457299 853 ntBASIC16.94■□□□□ 0.3
CDK3Q00526 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.94■□□□□ 0.3
CDK3Q00526 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.94■□□□□ 0.3
CDK3Q00526 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CDK3Q00526 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.94■□□□□ 0.3
CDK3Q00526 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.94■□□□□ 0.3
CDK3Q00526 AC116353.5-201ENST00000638148 1699 ntBASIC16.94■□□□□ 0.3
CDK3Q00526 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CDK3Q00526 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDK3Q00526 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDK3Q00526 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CDK3Q00526 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CDK3Q00526 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.93■□□□□ 0.3
CDK3Q00526 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK3Q00526 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.93■□□□□ 0.3
CDK3Q00526 AC092865.5-201ENST00000545435 363 ntBASIC16.93■□□□□ 0.3
CDK3Q00526 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK3Q00526 AC018845.2-201ENST00000568326 409 ntBASIC16.93■□□□□ 0.3
CDK3Q00526 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK3Q00526 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.93■□□□□ 0.3
CDK3Q00526 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 CROCCP2-202ENST00000412962 2773 ntBASIC16.93■□□□□ 0.3
CDK3Q00526 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.93■□□□□ 0.3
CDK3Q00526 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CDK3Q00526 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
CDK3Q00526 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK3Q00526 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK3Q00526 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 KRT18P13-201ENST00000400056 1290 ntBASIC16.92■□□□□ 0.3
CDK3Q00526 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
CDK3Q00526 AC023274.1-201ENST00000418278 595 ntBASIC16.92■□□□□ 0.3
CDK3Q00526 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK3Q00526 SLC25A6P2-201ENST00000497974 877 ntBASIC16.92■□□□□ 0.3
CDK3Q00526 AC002347.1-201ENST00000569543 541 ntBASIC16.92■□□□□ 0.3
CDK3Q00526 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.92■□□□□ 0.3
CDK3Q00526 AC010507.1-201ENST00000633895 436 ntBASIC16.92■□□□□ 0.3
CDK3Q00526 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK3Q00526 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK3Q00526 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK3Q00526 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK3Q00526 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK3Q00526 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CDK3Q00526 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK3Q00526 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK3Q00526 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK3Q00526 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK3Q00526 AC096734.2-201ENST00000562054 433 ntBASIC16.91■□□□□ 0.3
CDK3Q00526 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK3Q00526 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK3Q00526 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK3Q00526 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms