Protein–RNA interactions for Protein: Q00059

TFAM, Transcription factor A, mitochondrial, humanhuman

Known RBP Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFAMQ00059 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.68■□□□□ 0.58
TFAMQ00059 AL590627.1-203ENST00000421194 1026 ntBASIC18.68■□□□□ 0.58
TFAMQ00059 KRT18P27-201ENST00000427733 1299 ntBASIC18.68■□□□□ 0.58
TFAMQ00059 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.68■□□□□ 0.58
TFAMQ00059 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.68■□□□□ 0.58
TFAMQ00059 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.68■□□□□ 0.58
TFAMQ00059 MIR1199-201ENST00000621445 119 ntBASIC18.68■□□□□ 0.58
TFAMQ00059 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.68■□□□□ 0.58
TFAMQ00059 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.68■□□□□ 0.58
TFAMQ00059 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TFAMQ00059 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
TFAMQ00059 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TFAMQ00059 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.68■□□□□ 0.58
TFAMQ00059 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TFAMQ00059 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.68■□□□□ 0.58
TFAMQ00059 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TFAMQ00059 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TFAMQ00059 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.67■□□□□ 0.58
TFAMQ00059 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.67■□□□□ 0.58
TFAMQ00059 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TFAMQ00059 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.67■□□□□ 0.58
TFAMQ00059 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.67■□□□□ 0.58
TFAMQ00059 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.67■□□□□ 0.58
TFAMQ00059 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.67■□□□□ 0.58
TFAMQ00059 AL356488.2-201ENST00000602755 427 ntBASIC18.67■□□□□ 0.58
TFAMQ00059 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.67■□□□□ 0.58
TFAMQ00059 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TFAMQ00059 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TFAMQ00059 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.67■□□□□ 0.58
TFAMQ00059 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TFAMQ00059 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TFAMQ00059 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TFAMQ00059 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TFAMQ00059 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TFAMQ00059 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TFAMQ00059 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TFAMQ00059 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.66■□□□□ 0.58
TFAMQ00059 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 AC073621.1-201ENST00000392730 636 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 AC098831.1-202ENST00000438821 336 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 AC136632.2-201ENST00000512891 861 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.66■□□□□ 0.58
TFAMQ00059 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 AC120114.3-201ENST00000611923 658 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.66■□□□□ 0.58
TFAMQ00059 AC139713.2-201ENST00000641328 2723 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 IL9RP2-201ENST00000423948 1312 ntBASIC18.66■□□□□ 0.58
TFAMQ00059 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.66■□□□□ 0.58
TFAMQ00059 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TFAMQ00059 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TFAMQ00059 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.65■□□□□ 0.58
TFAMQ00059 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TFAMQ00059 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TFAMQ00059 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TFAMQ00059 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.65■□□□□ 0.58
TFAMQ00059 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.65■□□□□ 0.58
TFAMQ00059 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.65■□□□□ 0.58
TFAMQ00059 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.65■□□□□ 0.58
TFAMQ00059 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms