Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.22■□□□□ 0.03
UBE2NP61088 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2NP61088 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC15.22■□□□□ 0.03
UBE2NP61088 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2NP61088 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2NP61088 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
UBE2NP61088 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 AC148477.5-201ENST00000625164 1645 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
UBE2NP61088 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 LYSMD4-203ENST00000378904 2122 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.21■□□□□ 0.03
UBE2NP61088 RPS2P1-201ENST00000434010 821 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 AC009078.2-202ENST00000463353 338 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.21■□□□□ 0.03
UBE2NP61088 AC079776.4-201ENST00000511039 504 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
UBE2NP61088 AC139887.3-201ENST00000568585 713 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 AP001005.1-201ENST00000571755 1248 ntBASIC15.21■□□□□ 0.03
UBE2NP61088 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
UBE2NP61088 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
UBE2NP61088 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
UBE2NP61088 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.21■□□□□ 0.02
UBE2NP61088 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC15.21■□□□□ 0.02
UBE2NP61088 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
UBE2NP61088 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
UBE2NP61088 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBE2NP61088 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 AC097637.2-201ENST00000624096 1997 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 NCF1C-201ENST00000438382 1427 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 FLJ16779-201ENST00000612722 7638 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.2■□□□□ 0.02
UBE2NP61088 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBE2NP61088 AL031284.1-201ENST00000419297 478 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 LAGE3P1-201ENST00000425356 484 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.2■□□□□ 0.02
UBE2NP61088 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.2■□□□□ 0.02
UBE2NP61088 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.2■□□□□ 0.02
UBE2NP61088 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 AC006557.2-201ENST00000592985 1240 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 AL589182.2-201ENST00000619332 1049 ntBASIC15.2■□□□□ 0.02
UBE2NP61088 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.2■□□□□ 0.02
UBE2NP61088 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.2■□□□□ 0.02
UBE2NP61088 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
UBE2NP61088 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
UBE2NP61088 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms