Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.54■□□□□ 0.24
CLDN6P56747 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
CLDN6P56747 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN6P56747 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN6P56747 INGX-202ENST00000489074 768 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 AC112191.1-201ENST00000523689 701 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.54■□□□□ 0.24
CLDN6P56747 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.54■□□□□ 0.24
CLDN6P56747 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN6P56747 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
CLDN6P56747 AC009093.7-201ENST00000623853 1223 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.54■□□□□ 0.24
CLDN6P56747 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
CLDN6P56747 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 AC090164.3-201ENST00000610780 2143 ntBASIC16.54■□□□□ 0.24
CLDN6P56747 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CLDN6P56747 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN6P56747 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN6P56747 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 PMS2P4-201ENST00000412466 1052 ntBASIC16.53■□□□□ 0.24
CLDN6P56747 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN6P56747 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN6P56747 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN6P56747 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.53■□□□□ 0.24
CLDN6P56747 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.53■□□□□ 0.24
CLDN6P56747 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 AC026120.1-201ENST00000611536 926 ntBASIC16.53■□□□□ 0.24
CLDN6P56747 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLDN6P56747 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
CLDN6P56747 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
CLDN6P56747 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLDN6P56747 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN6P56747 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLDN6P56747 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN6P56747 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN6P56747 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.52■□□□□ 0.24
CLDN6P56747 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN6P56747 AL671277.1-201ENST00000429656 993 ntBASIC16.52■□□□□ 0.24
CLDN6P56747 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.52■□□□□ 0.24
CLDN6P56747 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.52■□□□□ 0.24
CLDN6P56747 AJ011932.1-201ENST00000621707 465 ntBASIC16.52■□□□□ 0.24
CLDN6P56747 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLDN6P56747 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN6P56747 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN6P56747 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN6P56747 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.52■□□□□ 0.23
CLDN6P56747 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLDN6P56747 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.52■□□□□ 0.23
CLDN6P56747 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLDN6P56747 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
CLDN6P56747 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLDN6P56747 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms