Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.11■□□□□ 0.17
PSMD4P55036 TSPY19P-201ENST00000418461 509 ntBASIC16.11■□□□□ 0.17
PSMD4P55036 AL020989.1-201ENST00000422979 469 ntBASIC16.11■□□□□ 0.17
PSMD4P55036 TSPY18P-201ENST00000441642 509 ntBASIC16.11■□□□□ 0.17
PSMD4P55036 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.11■□□□□ 0.17
PSMD4P55036 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
PSMD4P55036 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.11■□□□□ 0.17
PSMD4P55036 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.11■□□□□ 0.17
PSMD4P55036 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.11■□□□□ 0.17
PSMD4P55036 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 AC009336.1-201ENST00000608941 1553 ntBASIC16.11■□□□□ 0.17
PSMD4P55036 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PSMD4P55036 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PSMD4P55036 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.1■□□□□ 0.17
PSMD4P55036 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 RBM17P3-201ENST00000417687 1192 ntBASIC16.1■□□□□ 0.17
PSMD4P55036 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.1■□□□□ 0.17
PSMD4P55036 SIGLEC30P-201ENST00000455569 941 ntBASIC16.1■□□□□ 0.17
PSMD4P55036 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.1■□□□□ 0.17
PSMD4P55036 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.1■□□□□ 0.17
PSMD4P55036 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.1■□□□□ 0.17
PSMD4P55036 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PSMD4P55036 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.1■□□□□ 0.17
PSMD4P55036 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PSMD4P55036 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
PSMD4P55036 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
PSMD4P55036 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.09■□□□□ 0.17
PSMD4P55036 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.09■□□□□ 0.17
PSMD4P55036 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.09■□□□□ 0.17
PSMD4P55036 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.09■□□□□ 0.17
PSMD4P55036 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.09■□□□□ 0.17
PSMD4P55036 AC132008.2-207ENST00000454517 770 ntBASIC16.09■□□□□ 0.17
PSMD4P55036 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 CLEC4GP1-201ENST00000596555 870 ntBASIC16.09■□□□□ 0.17
PSMD4P55036 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.09■□□□□ 0.17
PSMD4P55036 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.09■□□□□ 0.17
PSMD4P55036 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.09■□□□□ 0.17
PSMD4P55036 AC132938.5-201ENST00000624980 1813 ntBASIC16.09■□□□□ 0.17
PSMD4P55036 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.09■□□□□ 0.17
PSMD4P55036 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.09■□□□□ 0.17
PSMD4P55036 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PSMD4P55036 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.09■□□□□ 0.17
PSMD4P55036 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms