Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 KRT18P65-201ENST00000439811 1286 ntBASIC16.77■□□□□ 0.28
CLCN2P51788 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.77■□□□□ 0.28
CLCN2P51788 AC104819.1-201ENST00000504587 486 ntBASIC16.77■□□□□ 0.28
CLCN2P51788 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN2P51788 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN2P51788 PRELID1P1-202ENST00000567272 903 ntBASIC16.77■□□□□ 0.28
CLCN2P51788 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.77■□□□□ 0.28
CLCN2P51788 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.77■□□□□ 0.28
CLCN2P51788 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CLCN2P51788 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.77■□□□□ 0.28
CLCN2P51788 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.77■□□□□ 0.27
CLCN2P51788 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.27
CLCN2P51788 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCN2P51788 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CLCN2P51788 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.77■□□□□ 0.27
CLCN2P51788 AC233702.3-201ENST00000578656 1387 ntBASIC16.77■□□□□ 0.27
CLCN2P51788 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CLCN2P51788 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 AL513523.2-202ENST00000427283 2040 ntBASIC16.76■□□□□ 0.27
CLCN2P51788 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.76■□□□□ 0.27
CLCN2P51788 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.76■□□□□ 0.27
CLCN2P51788 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.76■□□□□ 0.27
CLCN2P51788 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 AC100803.2-201ENST00000562459 1963 ntBASIC16.76■□□□□ 0.27
CLCN2P51788 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 LINC00167-201ENST00000530583 1419 ntBASIC16.76■□□□□ 0.27
CLCN2P51788 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CLCN2P51788 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CLCN2P51788 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CLCN2P51788 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CLCN2P51788 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
CLCN2P51788 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLCN2P51788 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
CLCN2P51788 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 NUS1P1-201ENST00000446295 882 ntBASIC16.75■□□□□ 0.27
CLCN2P51788 AC068472.1-201ENST00000474589 881 ntBASIC16.75■□□□□ 0.27
CLCN2P51788 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.75■□□□□ 0.27
CLCN2P51788 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.75■□□□□ 0.27
CLCN2P51788 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 AC074051.2-201ENST00000565115 352 ntBASIC16.75■□□□□ 0.27
CLCN2P51788 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.75■□□□□ 0.27
CLCN2P51788 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLCN2P51788 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CLCN2P51788 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.75■□□□□ 0.27
CLCN2P51788 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.75■□□□□ 0.27
CLCN2P51788 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms