Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 DUX4L17-201ENST00000557360 1267 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.64■□□□□ 0.25
SLC6A12P48065 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.64■□□□□ 0.25
SLC6A12P48065 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 AC064862.7-201ENST00000604520 867 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
SLC6A12P48065 AGGF1P2-201ENST00000426656 2106 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 AL590787.1-201ENST00000568856 1315 ntBASIC16.64■□□□□ 0.25
SLC6A12P48065 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SLC6A12P48065 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.64■□□□□ 0.25
SLC6A12P48065 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC6A12P48065 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
SLC6A12P48065 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SLC6A12P48065 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC6A12P48065 SAPCD2P3-201ENST00000455031 850 ntBASIC16.63■□□□□ 0.25
SLC6A12P48065 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.63■□□□□ 0.25
SLC6A12P48065 KRT18P56-201ENST00000507275 550 ntBASIC16.63■□□□□ 0.25
SLC6A12P48065 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC6A12P48065 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 AL589182.2-201ENST00000619332 1049 ntBASIC16.63■□□□□ 0.25
SLC6A12P48065 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
SLC6A12P48065 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
SLC6A12P48065 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SLC6A12P48065 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SLC6A12P48065 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.62■□□□□ 0.25
SLC6A12P48065 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
SLC6A12P48065 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
SLC6A12P48065 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SLC6A12P48065 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A12P48065 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 AF238378.1-201ENST00000526806 358 ntBASIC16.62■□□□□ 0.25
SLC6A12P48065 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.62■□□□□ 0.25
SLC6A12P48065 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A12P48065 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A12P48065 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.62■□□□□ 0.25
SLC6A12P48065 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SLC6A12P48065 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.62■□□□□ 0.25
SLC6A12P48065 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
SLC6A12P48065 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.61■□□□□ 0.25
SLC6A12P48065 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SLC6A12P48065 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A12P48065 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.61■□□□□ 0.25
SLC6A12P48065 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.61■□□□□ 0.25
SLC6A12P48065 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SLC6A12P48065 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms