Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX11P35716 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 AP000867.3-201ENST00000524675 377 ntBASIC16.94■□□□□ 0.3
SOX11P35716 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.94■□□□□ 0.3
SOX11P35716 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX11P35716 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.94■□□□□ 0.3
SOX11P35716 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
SOX11P35716 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SOX11P35716 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.94■□□□□ 0.3
SOX11P35716 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 AC133963.1-201ENST00000504166 1679 ntBASIC16.94■□□□□ 0.3
SOX11P35716 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
SOX11P35716 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SOX11P35716 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 PCDH8P1-201ENST00000428983 2773 ntBASIC16.93■□□□□ 0.3
SOX11P35716 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
SOX11P35716 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX11P35716 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX11P35716 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX11P35716 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.93■□□□□ 0.3
SOX11P35716 AC012615.1-201ENST00000565797 1299 ntBASIC16.93■□□□□ 0.3
SOX11P35716 RN7SL510P-201ENST00000581311 263 ntBASIC16.93■□□□□ 0.3
SOX11P35716 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SOX11P35716 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.93■□□□□ 0.3
SOX11P35716 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 AC106886.4-201ENST00000623557 2502 ntBASIC16.93■□□□□ 0.3
SOX11P35716 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SOX11P35716 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
SOX11P35716 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SOX11P35716 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SOX11P35716 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SOX11P35716 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 TSPY19P-201ENST00000418461 509 ntBASIC16.92■□□□□ 0.3
SOX11P35716 TSPY18P-201ENST00000441642 509 ntBASIC16.92■□□□□ 0.3
SOX11P35716 UNC93B7-201ENST00000509439 705 ntBASIC16.92■□□□□ 0.3
SOX11P35716 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.92■□□□□ 0.3
SOX11P35716 IGHV3-41-201ENST00000613121 348 ntBASIC16.92■□□□□ 0.3
SOX11P35716 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.92■□□□□ 0.3
SOX11P35716 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.92■□□□□ 0.3
SOX11P35716 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
SOX11P35716 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.92■□□□□ 0.3
SOX11P35716 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SOX11P35716 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms