Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC19.24■□□□□ 0.67
CTGFP29279 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CTGFP29279 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CTGFP29279 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CTGFP29279 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC19.23■□□□□ 0.67
CTGFP29279 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTGFP29279 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.23■□□□□ 0.67
CTGFP29279 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.23■□□□□ 0.67
CTGFP29279 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CTGFP29279 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 GPR53P-205ENST00000457298 1084 ntBASIC19.23■□□□□ 0.67
CTGFP29279 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.23■□□□□ 0.67
CTGFP29279 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC19.23■□□□□ 0.67
CTGFP29279 AC007967.4-201ENST00000614700 386 ntBASIC19.23■□□□□ 0.67
CTGFP29279 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.23■□□□□ 0.67
CTGFP29279 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CTGFP29279 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 AC138969.3-201ENST00000546612 1459 ntBASIC19.22■□□□□ 0.67
CTGFP29279 AC138932.2-201ENST00000548268 1459 ntBASIC19.22■□□□□ 0.67
CTGFP29279 AC126755.4-201ENST00000549796 1459 ntBASIC19.22■□□□□ 0.67
CTGFP29279 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
CTGFP29279 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CTGFP29279 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CTGFP29279 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
CTGFP29279 AC079776.1-201ENST00000401540 1152 ntBASIC19.22■□□□□ 0.67
CTGFP29279 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
CTGFP29279 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC19.22■□□□□ 0.67
CTGFP29279 AL132655.2-201ENST00000596276 594 ntBASIC19.22■□□□□ 0.67
CTGFP29279 AL844908.2-201ENST00000609461 460 ntBASIC19.22■□□□□ 0.67
CTGFP29279 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.22■□□□□ 0.67
CTGFP29279 AC004840.1-201ENST00000636359 365 ntBASIC19.22■□□□□ 0.67
CTGFP29279 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CTGFP29279 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.22■□□□□ 0.67
CTGFP29279 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CTGFP29279 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.22■□□□□ 0.67
CTGFP29279 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CTGFP29279 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.22■□□□□ 0.67
CTGFP29279 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.22■□□□□ 0.67
CTGFP29279 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.21■□□□□ 0.67
CTGFP29279 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
CTGFP29279 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.21■□□□□ 0.67
CTGFP29279 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.21■□□□□ 0.67
CTGFP29279 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 HLA-V-204ENST00000476601 1289 ntBASIC19.21■□□□□ 0.67
CTGFP29279 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.21■□□□□ 0.67
CTGFP29279 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 AC007541.1-201ENST00000570282 1469 ntBASIC19.21■□□□□ 0.67
CTGFP29279 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.21■□□□□ 0.67
CTGFP29279 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CTGFP29279 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CTGFP29279 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.2■□□□□ 0.66
CTGFP29279 FOXO1B-201ENST00000504678 1527 ntBASIC19.2■□□□□ 0.66
CTGFP29279 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CTGFP29279 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CTGFP29279 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.2■□□□□ 0.66
CTGFP29279 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTGFP29279 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CTGFP29279 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms