Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 AC148477.5-201ENST00000625164 1645 ntBASIC14.86□□□□□ -0.03
CCL1P22362 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
CCL1P22362 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
CCL1P22362 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.86□□□□□ -0.03
CCL1P22362 SPDYE21P-201ENST00000413323 827 ntBASIC14.86□□□□□ -0.03
CCL1P22362 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 POM121L3P-201ENST00000419331 1163 ntBASIC14.86□□□□□ -0.03
CCL1P22362 PCED1CP-201ENST00000419887 785 ntBASIC14.86□□□□□ -0.03
CCL1P22362 AL020989.1-201ENST00000422979 469 ntBASIC14.86□□□□□ -0.03
CCL1P22362 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL1P22362 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.86□□□□□ -0.03
CCL1P22362 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.86□□□□□ -0.03
CCL1P22362 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
CCL1P22362 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCL1P22362 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.86□□□□□ -0.03
CCL1P22362 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CCL1P22362 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
CCL1P22362 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CCL1P22362 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
CCL1P22362 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
CCL1P22362 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL1P22362 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL1P22362 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC14.85□□□□□ -0.03
CCL1P22362 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.85□□□□□ -0.03
CCL1P22362 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.85□□□□□ -0.03
CCL1P22362 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.85□□□□□ -0.03
CCL1P22362 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 AC073592.4-201ENST00000623827 446 ntBASIC14.85□□□□□ -0.03
CCL1P22362 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 PCDHB19P-201ENST00000570871 2371 ntBASIC14.85□□□□□ -0.03
CCL1P22362 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 IER3-202ENST00000376377 1350 ntBASIC14.85□□□□□ -0.03
CCL1P22362 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.85□□□□□ -0.03
CCL1P22362 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
CCL1P22362 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
CCL1P22362 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL1P22362 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCL1P22362 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL1P22362 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.84□□□□□ -0.03
CCL1P22362 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCL1P22362 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.84□□□□□ -0.03
CCL1P22362 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 LINC00265-3P-201ENST00000447588 903 ntBASIC14.84□□□□□ -0.03
CCL1P22362 KRT18P21-201ENST00000515767 1272 ntBASIC14.84□□□□□ -0.03
CCL1P22362 DUX4L17-201ENST00000557360 1267 ntBASIC14.84□□□□□ -0.03
CCL1P22362 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.84□□□□□ -0.03
CCL1P22362 MIR3180-1-201ENST00000580374 94 ntBASIC14.84□□□□□ -0.03
CCL1P22362 MIR3180-3-201ENST00000584616 94 ntBASIC14.84□□□□□ -0.03
CCL1P22362 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
CCL1P22362 AC092329.2-201ENST00000598402 547 ntBASIC14.84□□□□□ -0.03
CCL1P22362 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CCL1P22362 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL1P22362 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CCL1P22362 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.84□□□□□ -0.03
CCL1P22362 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CCL1P22362 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms