Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KCNA3P22001 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.93■□□□□ 0.94
KCNA3P22001 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC20.93■□□□□ 0.94
KCNA3P22001 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KCNA3P22001 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC20.93■□□□□ 0.94
KCNA3P22001 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.93■□□□□ 0.94
KCNA3P22001 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
KCNA3P22001 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 AC104794.3-201ENST00000566840 1248 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 ARL16-202ENST00000570561 768 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 NAA38-206ENST00000576384 424 ntTSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 AC140912.1-201ENST00000577171 1054 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 AC132938.2-201ENST00000579188 680 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 AL844908.2-201ENST00000609461 460 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 AC003101.2-201ENST00000612557 442 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 AC004840.1-201ENST00000636359 365 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 AL591163.1-201ENST00000641757 987 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.92■□□□□ 0.94
KCNA3P22001 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
KCNA3P22001 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 AC016027.1-202ENST00000607927 1699 ntBASIC20.92■□□□□ 0.94
KCNA3P22001 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KCNA3P22001 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KCNA3P22001 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNA3P22001 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KCNA3P22001 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNA3P22001 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KCNA3P22001 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.91■□□□□ 0.94
KCNA3P22001 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC20.91■□□□□ 0.94
KCNA3P22001 MTRF1LP2-201ENST00000506027 1122 ntBASIC20.91■□□□□ 0.94
KCNA3P22001 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC20.91■□□□□ 0.94
KCNA3P22001 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC20.91■□□□□ 0.94
KCNA3P22001 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KCNA3P22001 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.91■□□□□ 0.94
KCNA3P22001 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KCNA3P22001 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
KCNA3P22001 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNA3P22001 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 NARF-206ENST00000457415 1668 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNA3P22001 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 KRT18P55-202ENST00000578578 1546 ntBASIC20.9■□□□□ 0.94
KCNA3P22001 AL353732.1-201ENST00000569618 1459 ntBASIC20.9■□□□□ 0.94
KCNA3P22001 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.9■□□□□ 0.94
KCNA3P22001 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNA3P22001 AC112492.5-201ENST00000421897 457 ntBASIC20.9■□□□□ 0.94
KCNA3P22001 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC20.9■□□□□ 0.94
KCNA3P22001 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
KCNA3P22001 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.9■□□□□ 0.94
KCNA3P22001 AL031055.1-201ENST00000606362 631 ntBASIC20.9■□□□□ 0.94
KCNA3P22001 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.9■□□□□ 0.94
KCNA3P22001 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KCNA3P22001 REXO1L9P-201ENST00000604264 2108 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms