Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.06■□□□□ 0.16
PRKCAP17252 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
PRKCAP17252 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.06■□□□□ 0.16
PRKCAP17252 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.06■□□□□ 0.16
PRKCAP17252 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.06■□□□□ 0.16
PRKCAP17252 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PRKCAP17252 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 LINC00304-203ENST00000565008 1864 ntBASIC16.05■□□□□ 0.16
PRKCAP17252 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRKCAP17252 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PRKCAP17252 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PRKCAP17252 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PRKCAP17252 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.05■□□□□ 0.16
PRKCAP17252 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.05■□□□□ 0.16
PRKCAP17252 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.05■□□□□ 0.16
PRKCAP17252 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.05■□□□□ 0.16
PRKCAP17252 BNIP3P18-201ENST00000593976 575 ntBASIC16.05■□□□□ 0.16
PRKCAP17252 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PRKCAP17252 LINC01451-201ENST00000623792 534 ntBASIC16.05■□□□□ 0.16
PRKCAP17252 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.05■□□□□ 0.16
PRKCAP17252 AC133963.1-201ENST00000504166 1679 ntBASIC16.05■□□□□ 0.16
PRKCAP17252 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PRKCAP17252 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.05■□□□□ 0.16
PRKCAP17252 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.04■□□□□ 0.16
PRKCAP17252 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 TP73-AS1-210ENST00000637775 1455 ntBASIC16.04■□□□□ 0.16
PRKCAP17252 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 FAM220CP-201ENST00000395253 831 ntBASIC16.04■□□□□ 0.16
PRKCAP17252 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.04■□□□□ 0.16
PRKCAP17252 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.04■□□□□ 0.16
PRKCAP17252 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.04■□□□□ 0.16
PRKCAP17252 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 AC011467.2-201ENST00000598425 242 ntBASIC16.04■□□□□ 0.16
PRKCAP17252 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.04■□□□□ 0.16
PRKCAP17252 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 PCDHA1-201ENST00000378133 2726 ntBASIC16.04■□□□□ 0.16
PRKCAP17252 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.04■□□□□ 0.16
PRKCAP17252 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.04■□□□□ 0.16
PRKCAP17252 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRKCAP17252 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms