Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL4AP11441 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
UBL4AP11441 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.03■□□□□ 0.16
UBL4AP11441 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
UBL4AP11441 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.03■□□□□ 0.16
UBL4AP11441 AC138894.3-201ENST00000603787 634 ntBASIC16.03■□□□□ 0.16
UBL4AP11441 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
UBL4AP11441 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL4AP11441 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.03■□□□□ 0.16
UBL4AP11441 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL4AP11441 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL4AP11441 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.03■□□□□ 0.16
UBL4AP11441 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.03■□□□□ 0.16
UBL4AP11441 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC16.03■□□□□ 0.16
UBL4AP11441 AL353593.2-201ENST00000602529 1483 ntBASIC16.03■□□□□ 0.16
UBL4AP11441 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL4AP11441 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
UBL4AP11441 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
UBL4AP11441 LINC00554-201ENST00000564841 3011 ntBASIC16.03■□□□□ 0.16
UBL4AP11441 AC016396.2-201ENST00000562575 1417 ntBASIC16.02■□□□□ 0.16
UBL4AP11441 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBL4AP11441 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
UBL4AP11441 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
UBL4AP11441 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBL4AP11441 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBL4AP11441 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.02■□□□□ 0.16
UBL4AP11441 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 PCDHA1-201ENST00000378133 2726 ntBASIC16.02■□□□□ 0.16
UBL4AP11441 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
UBL4AP11441 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
UBL4AP11441 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
UBL4AP11441 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.02■□□□□ 0.16
UBL4AP11441 STK25P1-201ENST00000585406 838 ntBASIC16.02■□□□□ 0.16
UBL4AP11441 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
UBL4AP11441 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.02■□□□□ 0.16
UBL4AP11441 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
UBL4AP11441 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL4AP11441 OR6D1P-203ENST00000641209 4860 ntBASIC16.02■□□□□ 0.15
UBL4AP11441 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
UBL4AP11441 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.02■□□□□ 0.15
UBL4AP11441 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 AC046185.3-201ENST00000623228 1824 ntBASIC16.01■□□□□ 0.15
UBL4AP11441 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.01■□□□□ 0.15
UBL4AP11441 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.01■□□□□ 0.15
UBL4AP11441 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.01■□□□□ 0.15
UBL4AP11441 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
UBL4AP11441 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.01■□□□□ 0.15
UBL4AP11441 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBL4AP11441 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBL4AP11441 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
UBL4AP11441 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
UBL4AP11441 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms