Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 MRPL20P1-201ENST00000400819 433 ntBASIC13.52□□□□□ -0.25
CD28P10747 AC211486.1-202ENST00000416371 468 ntBASIC13.52□□□□□ -0.25
CD28P10747 HNRNPA1P28-201ENST00000424481 961 ntBASIC13.52□□□□□ -0.25
CD28P10747 PRSS29P-201ENST00000440800 595 ntBASIC13.52□□□□□ -0.25
CD28P10747 HCG4B-203ENST00000450128 991 ntBASIC13.52□□□□□ -0.25
CD28P10747 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.52□□□□□ -0.25
CD28P10747 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 AC211476.1-201ENST00000503899 468 ntBASIC13.52□□□□□ -0.25
CD28P10747 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.52□□□□□ -0.25
CD28P10747 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.52□□□□□ -0.25
CD28P10747 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 AL805961.1-202ENST00000641562 540 ntBASIC13.52□□□□□ -0.25
CD28P10747 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.52□□□□□ -0.25
CD28P10747 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC13.52□□□□□ -0.25
CD28P10747 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD28P10747 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD28P10747 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CD28P10747 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 MADD-208ENST00000405573 1823 ntTSL 5 BASIC13.51□□□□□ -0.25
CD28P10747 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CD28P10747 FLJ13224-201ENST00000313737 1514 ntBASIC13.51□□□□□ -0.25
CD28P10747 KRT18P55-202ENST00000578578 1546 ntBASIC13.51□□□□□ -0.25
CD28P10747 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 GPR89P-201ENST00000407924 1495 ntBASIC13.51□□□□□ -0.25
CD28P10747 AC002310.6-201ENST00000624451 1377 ntBASIC13.51□□□□□ -0.25
CD28P10747 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.51□□□□□ -0.25
CD28P10747 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.51□□□□□ -0.25
CD28P10747 MCCD1P2-201ENST00000423228 335 ntBASIC13.51□□□□□ -0.25
CD28P10747 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD28P10747 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 DNAJB3-202ENST00000449667 1266 ntBASIC13.51□□□□□ -0.25
CD28P10747 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CD28P10747 AC005829.1-201ENST00000570002 483 ntBASIC13.51□□□□□ -0.25
CD28P10747 AL353135.1-201ENST00000606729 504 ntBASIC13.51□□□□□ -0.25
CD28P10747 AL596442.2-201ENST00000610240 980 ntBASIC13.51□□□□□ -0.25
CD28P10747 AL513190.1-201ENST00000621254 727 ntBASIC13.51□□□□□ -0.25
CD28P10747 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.51□□□□□ -0.25
CD28P10747 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CD28P10747 AC135050.7-201ENST00000624508 2218 ntBASIC13.51□□□□□ -0.25
CD28P10747 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.51□□□□□ -0.25
CD28P10747 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD28P10747 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CD28P10747 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
CD28P10747 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CD28P10747 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD28P10747 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms