Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 AC005829.1-201ENST00000570002 483 ntBASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RAB40ALP0C0E4 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 AC211486.1-202ENST00000416371 468 ntBASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 AC211476.1-201ENST00000503899 468 ntBASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 YBX1P5-201ENST00000509441 847 ntBASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 AC096734.2-201ENST00000562054 433 ntBASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.27■□□□□ 0.2
RAB40ALP0C0E4 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 LINC00896-202ENST00000609602 2128 ntBASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RAB40ALP0C0E4 AC138028.4-201ENST00000564984 1845 ntBASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 AP006288.1-201ENST00000446065 395 ntBASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 C20orf181-201ENST00000623918 480 ntBASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 AC092865.6-201ENST00000642101 219 ntBASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RAB40ALP0C0E4 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms