Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
TPM3P06753 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM3P06753 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TPM3P06753 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TPM3P06753 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TPM3P06753 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 GCSHP5-201ENST00000443090 522 ntBASIC19.41■□□□□ 0.7
TPM3P06753 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM3P06753 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.41■□□□□ 0.7
TPM3P06753 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.41■□□□□ 0.7
TPM3P06753 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
TPM3P06753 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.41■□□□□ 0.7
TPM3P06753 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.41■□□□□ 0.7
TPM3P06753 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TPM3P06753 AC063926.3-201ENST00000624734 5658 ntBASIC19.4■□□□□ 0.7
TPM3P06753 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.4■□□□□ 0.7
TPM3P06753 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 AC024563.2-201ENST00000603282 481 ntBASIC19.4■□□□□ 0.7
TPM3P06753 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC19.4■□□□□ 0.7
TPM3P06753 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TPM3P06753 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TPM3P06753 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TPM3P06753 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
TPM3P06753 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TPM3P06753 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 AC068587.6-202ENST00000641839 5619 ntBASIC19.39■□□□□ 0.69
TPM3P06753 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TPM3P06753 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC19.39■□□□□ 0.69
TPM3P06753 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM3P06753 MIR718-201ENST00000390190 70 ntBASIC19.39■□□□□ 0.69
TPM3P06753 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TPM3P06753 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM3P06753 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.39■□□□□ 0.69
TPM3P06753 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TPM3P06753 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM3P06753 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.39■□□□□ 0.69
TPM3P06753 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.39■□□□□ 0.69
TPM3P06753 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.39■□□□□ 0.69
TPM3P06753 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
TPM3P06753 AL157888.1-201ENST00000631930 593 ntBASIC19.39■□□□□ 0.69
TPM3P06753 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TPM3P06753 KRT8P9-201ENST00000558927 1449 ntBASIC19.39■□□□□ 0.69
TPM3P06753 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms