Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.14■□□□□ 0.49
RB1P06400 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.14■□□□□ 0.49
RB1P06400 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.14■□□□□ 0.49
RB1P06400 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.14■□□□□ 0.49
RB1P06400 SSH2-211ENST00000590153 570 ntTSL 4 BASIC18.14■□□□□ 0.49
RB1P06400 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.14■□□□□ 0.49
RB1P06400 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.14■□□□□ 0.49
RB1P06400 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RB1P06400 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.14■□□□□ 0.49
RB1P06400 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 WASH6P-202ENST00000359512 1437 ntBASIC18.14■□□□□ 0.49
RB1P06400 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RB1P06400 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.14■□□□□ 0.49
RB1P06400 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 WIZP1-201ENST00000531444 2299 ntBASIC18.13■□□□□ 0.49
RB1P06400 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RB1P06400 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC18.13■□□□□ 0.49
RB1P06400 AC008267.7-201ENST00000624570 1194 ntBASIC18.13■□□□□ 0.49
RB1P06400 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RB1P06400 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RB1P06400 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.13■□□□□ 0.49
RB1P06400 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RB1P06400 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
RB1P06400 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.12■□□□□ 0.49
RB1P06400 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.12■□□□□ 0.49
RB1P06400 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 CRB3P1-201ENST00000449338 276 ntBASIC18.12■□□□□ 0.49
RB1P06400 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 HLA-J-202ENST00000469281 1241 ntBASIC18.12■□□□□ 0.49
RB1P06400 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.12■□□□□ 0.49
RB1P06400 ALG1L8P-201ENST00000533887 760 ntBASIC18.12■□□□□ 0.49
RB1P06400 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 MIR6080-201ENST00000617359 66 ntBASIC18.12■□□□□ 0.49
RB1P06400 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 AC093503.3-201ENST00000624917 2352 ntBASIC18.12■□□□□ 0.49
RB1P06400 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.12■□□□□ 0.49
RB1P06400 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RB1P06400 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.11■□□□□ 0.49
RB1P06400 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RB1P06400 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC18.11■□□□□ 0.49
RB1P06400 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RB1P06400 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.11■□□□□ 0.49
RB1P06400 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms