Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC13.72□□□□□ -0.21
IFNA1P01562 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
IFNA1P01562 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
IFNA1P01562 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.71□□□□□ -0.21
IFNA1P01562 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.71□□□□□ -0.21
IFNA1P01562 KRT18P23-201ENST00000435622 1283 ntBASIC13.71□□□□□ -0.21
IFNA1P01562 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.71□□□□□ -0.21
IFNA1P01562 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.71□□□□□ -0.21
IFNA1P01562 RARRES2P10-201ENST00000564312 460 ntBASIC13.71□□□□□ -0.21
IFNA1P01562 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC13.71□□□□□ -0.21
IFNA1P01562 AC011298.2-201ENST00000617989 482 ntBASIC13.71□□□□□ -0.21
IFNA1P01562 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
IFNA1P01562 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
IFNA1P01562 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
IFNA1P01562 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.71□□□□□ -0.22
IFNA1P01562 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 KRT8P9-201ENST00000558927 1449 ntBASIC13.71□□□□□ -0.22
IFNA1P01562 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
IFNA1P01562 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 RNF216P1-203ENST00000404404 2427 ntBASIC13.71□□□□□ -0.22
IFNA1P01562 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
IFNA1P01562 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
IFNA1P01562 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
IFNA1P01562 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
IFNA1P01562 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
IFNA1P01562 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 PAUPAR-201ENST00000630360 2965 ntBASIC13.7□□□□□ -0.22
IFNA1P01562 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IFNA1P01562 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 FAM207BP-201ENST00000447172 505 ntBASIC13.7□□□□□ -0.22
IFNA1P01562 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC13.7□□□□□ -0.22
IFNA1P01562 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.7□□□□□ -0.22
IFNA1P01562 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.7□□□□□ -0.22
IFNA1P01562 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.7□□□□□ -0.22
IFNA1P01562 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 KLF2-202ENST00000592003 564 ntTSL 3 BASIC13.7□□□□□ -0.22
IFNA1P01562 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
IFNA1P01562 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.7□□□□□ -0.22
IFNA1P01562 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.7□□□□□ -0.22
IFNA1P01562 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
IFNA1P01562 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms