Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO1P00395 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 LAGE3P1-201ENST00000425356 484 ntBASIC17.73■□□□□ 0.43
MT-CO1P00395 AC092910.1-201ENST00000482027 1129 ntBASIC17.73■□□□□ 0.43
MT-CO1P00395 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.73■□□□□ 0.43
MT-CO1P00395 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO1P00395 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.73■□□□□ 0.43
MT-CO1P00395 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
MT-CO1P00395 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
MT-CO1P00395 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-CO1P00395 AC105339.3-201ENST00000560043 636 ntBASIC17.72■□□□□ 0.43
MT-CO1P00395 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.72■□□□□ 0.43
MT-CO1P00395 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.72■□□□□ 0.43
MT-CO1P00395 AL139327.4-201ENST00000612362 153 ntBASIC17.72■□□□□ 0.43
MT-CO1P00395 AF228730.7-201ENST00000641842 219 ntBASIC17.72■□□□□ 0.43
MT-CO1P00395 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 LYSMD4-203ENST00000378904 2122 ntBASIC17.72■□□□□ 0.43
MT-CO1P00395 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-CO1P00395 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
MT-CO1P00395 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.72■□□□□ 0.43
MT-CO1P00395 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
MT-CO1P00395 AC097637.2-201ENST00000624096 1997 ntBASIC17.71■□□□□ 0.43
MT-CO1P00395 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 AC133963.1-201ENST00000504166 1679 ntBASIC17.71■□□□□ 0.43
MT-CO1P00395 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-CO1P00395 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.71■□□□□ 0.43
MT-CO1P00395 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.71■□□□□ 0.43
MT-CO1P00395 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
MT-CO1P00395 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 AL589182.2-201ENST00000619332 1049 ntBASIC17.71■□□□□ 0.43
MT-CO1P00395 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
MT-CO1P00395 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
MT-CO1P00395 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.71■□□□□ 0.43
MT-CO1P00395 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
MT-CO1P00395 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
MT-CO1P00395 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
MT-CO1P00395 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 AC046185.3-201ENST00000623228 1824 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.7■□□□□ 0.42
MT-CO1P00395 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 PP12613-201ENST00000424958 2230 ntBASIC17.7■□□□□ 0.42
MT-CO1P00395 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
MT-CO1P00395 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms