Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRUB2O95900 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 LINC02012-201ENST00000608206 1725 ntBASIC18.1■□□□□ 0.49
TRUB2O95900 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.1■□□□□ 0.49
TRUB2O95900 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.1■□□□□ 0.49
TRUB2O95900 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 SLC25A6P4-201ENST00000586535 553 ntBASIC18.1■□□□□ 0.49
TRUB2O95900 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB2O95900 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 AC097637.2-201ENST00000624096 1997 ntBASIC18.1■□□□□ 0.49
TRUB2O95900 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
TRUB2O95900 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB2O95900 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB2O95900 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRUB2O95900 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.09■□□□□ 0.49
TRUB2O95900 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.09■□□□□ 0.49
TRUB2O95900 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRUB2O95900 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRUB2O95900 RPS2P1-201ENST00000434010 821 ntBASIC18.09■□□□□ 0.49
TRUB2O95900 HNRNPDP1-201ENST00000439535 754 ntBASIC18.09■□□□□ 0.49
TRUB2O95900 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.09■□□□□ 0.49
TRUB2O95900 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRUB2O95900 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB2O95900 AC064862.7-201ENST00000604520 867 ntBASIC18.09■□□□□ 0.49
TRUB2O95900 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
TRUB2O95900 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
TRUB2O95900 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB2O95900 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
TRUB2O95900 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
TRUB2O95900 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB2O95900 AL121761.2-201ENST00000598007 1648 ntBASIC18.09■□□□□ 0.49
TRUB2O95900 AD000864.1-201ENST00000624076 2295 ntBASIC18.09■□□□□ 0.49
TRUB2O95900 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB2O95900 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB2O95900 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB2O95900 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRUB2O95900 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.08■□□□□ 0.49
TRUB2O95900 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
TRUB2O95900 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRUB2O95900 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.08■□□□□ 0.48
TRUB2O95900 AC026396.1-201ENST00000419388 421 ntBASIC18.08■□□□□ 0.48
TRUB2O95900 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
TRUB2O95900 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.08■□□□□ 0.48
TRUB2O95900 AL773604.1-201ENST00000617417 272 ntBASIC18.08■□□□□ 0.48
TRUB2O95900 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.08■□□□□ 0.48
TRUB2O95900 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.08■□□□□ 0.48
TRUB2O95900 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.08■□□□□ 0.48
TRUB2O95900 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.08■□□□□ 0.48
TRUB2O95900 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.08■□□□□ 0.48
TRUB2O95900 AC060834.1-201ENST00000443027 2032 ntBASIC18.08■□□□□ 0.48
TRUB2O95900 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRUB2O95900 OR6D1P-202ENST00000641007 5290 ntBASIC18.07■□□□□ 0.48
TRUB2O95900 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRUB2O95900 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms