Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 CEND1P1-201ENST00000451006 455 ntBASIC14.49□□□□□ -0.09
ABCA1O95477 COX20P2-201ENST00000452636 358 ntBASIC14.49□□□□□ -0.09
ABCA1O95477 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 AC004877.2-201ENST00000623941 599 ntBASIC14.49□□□□□ -0.09
ABCA1O95477 AC073592.5-201ENST00000624854 528 ntBASIC14.49□□□□□ -0.09
ABCA1O95477 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 PC-214ENST00000628663 1470 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 EML3-217ENST00000531557 2509 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC14.49□□□□□ -0.09
ABCA1O95477 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.49□□□□□ -0.09
ABCA1O95477 AC004449.1-201ENST00000564240 433 ntBASIC14.49□□□□□ -0.09
ABCA1O95477 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.49□□□□□ -0.09
ABCA1O95477 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ABCA1O95477 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC14.49□□□□□ -0.09
ABCA1O95477 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ABCA1O95477 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ABCA1O95477 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
ABCA1O95477 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 BCRP1-201ENST00000444246 691 ntBASIC14.48□□□□□ -0.09
ABCA1O95477 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA1O95477 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.48□□□□□ -0.09
ABCA1O95477 AC092902.6-201ENST00000641783 218 ntBASIC14.48□□□□□ -0.09
ABCA1O95477 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
ABCA1O95477 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 AC079328.2-201ENST00000561241 3354 ntBASIC14.48□□□□□ -0.09
ABCA1O95477 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
ABCA1O95477 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 AC005498.2-205ENST00000593218 784 ntBASIC14.48□□□□□ -0.09
ABCA1O95477 AL513210.1-201ENST00000629608 234 ntBASIC14.48□□□□□ -0.09
ABCA1O95477 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ABCA1O95477 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.48□□□□□ -0.09
ABCA1O95477 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
ABCA1O95477 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ABCA1O95477 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ABCA1O95477 ABALON-201ENST00000629058 1903 ntBASIC14.47□□□□□ -0.09
ABCA1O95477 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms