Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.39■□□□□ 0.37
VAPBO95292 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.39■□□□□ 0.37
VAPBO95292 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VAPBO95292 AC010331.1-201ENST00000611423 582 ntBASIC17.39■□□□□ 0.37
VAPBO95292 AC092119.3-201ENST00000612618 583 ntBASIC17.39■□□□□ 0.37
VAPBO95292 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.39■□□□□ 0.37
VAPBO95292 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.39■□□□□ 0.37
VAPBO95292 AC073592.5-201ENST00000624854 528 ntBASIC17.39■□□□□ 0.37
VAPBO95292 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VAPBO95292 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VAPBO95292 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VAPBO95292 AC106886.4-201ENST00000623557 2502 ntBASIC17.39■□□□□ 0.37
VAPBO95292 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.38■□□□□ 0.37
VAPBO95292 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 KLF4P1-201ENST00000412782 1185 ntBASIC17.38■□□□□ 0.37
VAPBO95292 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.38■□□□□ 0.37
VAPBO95292 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.38■□□□□ 0.37
VAPBO95292 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.38■□□□□ 0.37
VAPBO95292 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
VAPBO95292 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
VAPBO95292 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VAPBO95292 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
VAPBO95292 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 ATP5G2P1-201ENST00000433580 426 ntBASIC17.37■□□□□ 0.37
VAPBO95292 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.37■□□□□ 0.37
VAPBO95292 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.37■□□□□ 0.37
VAPBO95292 AC012615.1-201ENST00000565797 1299 ntBASIC17.37■□□□□ 0.37
VAPBO95292 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.37■□□□□ 0.37
VAPBO95292 AC092329.2-201ENST00000598402 547 ntBASIC17.37■□□□□ 0.37
VAPBO95292 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 AC114341.1-201ENST00000618070 349 ntBASIC17.37■□□□□ 0.37
VAPBO95292 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
VAPBO95292 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
VAPBO95292 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
VAPBO95292 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
VAPBO95292 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.37■□□□□ 0.37
VAPBO95292 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms