Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX4O95219 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX4O95219 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX4O95219 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.3■□□□□ 0.2
SNX4O95219 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.3■□□□□ 0.2
SNX4O95219 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.3■□□□□ 0.2
SNX4O95219 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SNX4O95219 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.3■□□□□ 0.2
SNX4O95219 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 NUS1P2-201ENST00000417358 873 ntBASIC16.29■□□□□ 0.2
SNX4O95219 AC096633.1-201ENST00000422446 749 ntBASIC16.29■□□□□ 0.2
SNX4O95219 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX4O95219 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.29■□□□□ 0.2
SNX4O95219 MIR5100-201ENST00000579544 119 ntBASIC16.29■□□□□ 0.2
SNX4O95219 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SNX4O95219 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 AC011467.2-201ENST00000598425 242 ntBASIC16.29■□□□□ 0.2
SNX4O95219 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX4O95219 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX4O95219 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.29■□□□□ 0.2
SNX4O95219 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SNX4O95219 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SNX4O95219 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SNX4O95219 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.28■□□□□ 0.2
SNX4O95219 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
SNX4O95219 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.28■□□□□ 0.2
SNX4O95219 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.28■□□□□ 0.2
SNX4O95219 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 AL591684.3-201ENST00000605187 298 ntBASIC16.28■□□□□ 0.2
SNX4O95219 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.28■□□□□ 0.2
SNX4O95219 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SNX4O95219 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.28■□□□□ 0.2
SNX4O95219 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.28■□□□□ 0.2
SNX4O95219 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms