Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 AC091607.1-201ENST00000490318 1060 ntBASIC19.18■□□□□ 0.66
CLSTN1O94985 MIR3652-201ENST00000579335 131 ntBASIC19.18■□□□□ 0.66
CLSTN1O94985 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.18■□□□□ 0.66
CLSTN1O94985 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CLSTN1O94985 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CLSTN1O94985 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CLSTN1O94985 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CLSTN1O94985 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.17■□□□□ 0.66
CLSTN1O94985 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.17■□□□□ 0.66
CLSTN1O94985 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 AC108860.2-201ENST00000562760 2183 ntBASIC19.17■□□□□ 0.66
CLSTN1O94985 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.17■□□□□ 0.66
CLSTN1O94985 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CLSTN1O94985 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 MST1L-201ENST00000442552 2185 ntBASIC19.16■□□□□ 0.66
CLSTN1O94985 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 NSUN5P1-202ENST00000421140 1535 ntBASIC19.16■□□□□ 0.66
CLSTN1O94985 NSUN5P2-203ENST00000457352 1529 ntBASIC19.16■□□□□ 0.66
CLSTN1O94985 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CLSTN1O94985 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19.16■□□□□ 0.66
CLSTN1O94985 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
CLSTN1O94985 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.16■□□□□ 0.66
CLSTN1O94985 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.16■□□□□ 0.66
CLSTN1O94985 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CLSTN1O94985 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CLSTN1O94985 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.16■□□□□ 0.66
CLSTN1O94985 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
CLSTN1O94985 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 AC246785.2-201ENST00000432512 513 ntBASIC19.15■□□□□ 0.66
CLSTN1O94985 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CLSTN1O94985 KRT18P56-201ENST00000507275 550 ntBASIC19.15■□□□□ 0.66
CLSTN1O94985 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.15■□□□□ 0.66
CLSTN1O94985 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.15■□□□□ 0.66
CLSTN1O94985 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.15■□□□□ 0.66
CLSTN1O94985 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CLSTN1O94985 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.15■□□□□ 0.66
CLSTN1O94985 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CLSTN1O94985 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.15■□□□□ 0.66
CLSTN1O94985 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.14■□□□□ 0.66
CLSTN1O94985 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CLSTN1O94985 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CLSTN1O94985 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.14■□□□□ 0.65
CLSTN1O94985 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CLSTN1O94985 PCDHA12-202ENST00000613593 2588 ntBASIC19.14■□□□□ 0.65
CLSTN1O94985 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLSTN1O94985 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.14■□□□□ 0.65
CLSTN1O94985 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLSTN1O94985 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLSTN1O94985 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CLSTN1O94985 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.14■□□□□ 0.65
CLSTN1O94985 AL845331.1-201ENST00000424978 1190 ntBASIC19.14■□□□□ 0.65
CLSTN1O94985 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms