Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC22.61■■□□□ 1.21
LTN1O94822 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC22.61■■□□□ 1.21
LTN1O94822 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
LTN1O94822 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
LTN1O94822 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
LTN1O94822 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC22.6■■□□□ 1.21
LTN1O94822 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC22.6■■□□□ 1.21
LTN1O94822 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC22.6■■□□□ 1.21
LTN1O94822 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
LTN1O94822 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 HNRNPA1P40-201ENST00000426371 1278 ntBASIC22.59■■□□□ 1.21
LTN1O94822 WBP2-203ENST00000433525 928 ntTSL 2 BASIC22.59■■□□□ 1.21
LTN1O94822 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC22.59■■□□□ 1.21
LTN1O94822 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC22.59■■□□□ 1.21
LTN1O94822 AL138688.1-201ENST00000624851 1594 ntBASIC22.59■■□□□ 1.21
LTN1O94822 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC22.59■■□□□ 1.21
LTN1O94822 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.59■■□□□ 1.21
LTN1O94822 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
LTN1O94822 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
LTN1O94822 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
LTN1O94822 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC22.59■■□□□ 1.21
LTN1O94822 AC008764.6-201ENST00000595909 2069 ntBASIC22.59■■□□□ 1.21
LTN1O94822 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
LTN1O94822 AC142381.1-201ENST00000426099 345 ntBASIC22.58■■□□□ 1.21
LTN1O94822 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC22.58■■□□□ 1.21
LTN1O94822 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC22.58■■□□□ 1.21
LTN1O94822 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC22.58■■□□□ 1.21
LTN1O94822 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.21
LTN1O94822 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC22.58■■□□□ 1.21
LTN1O94822 AL035252.4-201ENST00000624174 288 ntBASIC22.58■■□□□ 1.21
LTN1O94822 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 LINC00896-202ENST00000609602 2128 ntBASIC22.58■■□□□ 1.21
LTN1O94822 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
LTN1O94822 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC22.58■■□□□ 1.2
LTN1O94822 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.2
LTN1O94822 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
LTN1O94822 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC22.58■■□□□ 1.2
LTN1O94822 CRB3P1-201ENST00000449338 276 ntBASIC22.58■■□□□ 1.2
LTN1O94822 AC004890.2-204ENST00000481968 304 ntBASIC22.58■■□□□ 1.2
LTN1O94822 IGHV3-42-201ENST00000520410 361 ntBASIC22.58■■□□□ 1.2
LTN1O94822 AC105233.2-201ENST00000523697 349 ntBASIC22.58■■□□□ 1.2
LTN1O94822 AF228730.5-201ENST00000530288 346 ntBASIC22.58■■□□□ 1.2
LTN1O94822 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC22.58■■□□□ 1.2
LTN1O94822 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC22.58■■□□□ 1.2
LTN1O94822 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC22.58■■□□□ 1.2
LTN1O94822 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC22.58■■□□□ 1.2
LTN1O94822 AC093525.9-201ENST00000624961 1746 ntBASIC22.57■■□□□ 1.2
LTN1O94822 FRMD8P1-201ENST00000440433 1524 ntBASIC22.57■■□□□ 1.2
LTN1O94822 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC22.57■■□□□ 1.2
LTN1O94822 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC22.57■■□□□ 1.2
LTN1O94822 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC22.57■■□□□ 1.2
LTN1O94822 TDG-209ENST00000544861 1387 ntTSL 2 BASIC22.57■■□□□ 1.2
LTN1O94822 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC22.57■■□□□ 1.2
LTN1O94822 CD276-201ENST00000318424 2738 ntTSL 5 BASIC22.57■■□□□ 1.2
LTN1O94822 AC100757.3-201ENST00000622361 1406 ntBASIC22.57■■□□□ 1.2
LTN1O94822 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
LTN1O94822 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
LTN1O94822 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms