Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 HLA-F-220ENST00000434407 884 ntBASIC16.97■□□□□ 0.31
VPS4BO75351 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VPS4BO75351 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.97■□□□□ 0.31
VPS4BO75351 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
VPS4BO75351 BX640515.1-201ENST00000617215 977 ntBASIC16.97■□□□□ 0.31
VPS4BO75351 AC079602.3-201ENST00000623931 403 ntBASIC16.97■□□□□ 0.31
VPS4BO75351 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS4BO75351 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
VPS4BO75351 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VPS4BO75351 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.97■□□□□ 0.31
VPS4BO75351 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VPS4BO75351 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
VPS4BO75351 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 AC106886.4-201ENST00000623557 2502 ntBASIC16.96■□□□□ 0.31
VPS4BO75351 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VPS4BO75351 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
VPS4BO75351 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.96■□□□□ 0.31
VPS4BO75351 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS4BO75351 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.96■□□□□ 0.31
VPS4BO75351 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.96■□□□□ 0.31
VPS4BO75351 AC064862.7-201ENST00000604520 867 ntBASIC16.96■□□□□ 0.31
VPS4BO75351 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VPS4BO75351 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VPS4BO75351 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS4BO75351 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.96■□□□□ 0.3
VPS4BO75351 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS4BO75351 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS4BO75351 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VPS4BO75351 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VPS4BO75351 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS4BO75351 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.96■□□□□ 0.3
VPS4BO75351 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.96■□□□□ 0.3
VPS4BO75351 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VPS4BO75351 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VPS4BO75351 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
VPS4BO75351 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 MTCL1P1-201ENST00000446207 792 ntBASIC16.95■□□□□ 0.3
VPS4BO75351 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 AC138894.3-201ENST00000603787 634 ntBASIC16.95■□□□□ 0.3
VPS4BO75351 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 AC060834.1-201ENST00000443027 2032 ntBASIC16.95■□□□□ 0.3
VPS4BO75351 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS4BO75351 LINC02012-201ENST00000608206 1725 ntBASIC16.95■□□□□ 0.3
VPS4BO75351 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.95■□□□□ 0.3
VPS4BO75351 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.95■□□□□ 0.3
VPS4BO75351 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VPS4BO75351 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS4BO75351 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS4BO75351 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VPS4BO75351 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VPS4BO75351 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms