Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.43■□□□□ 0.06
PFDN1O60925 AL357033.4-201ENST00000617703 1807 ntBASIC15.43■□□□□ 0.06
PFDN1O60925 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.43■□□□□ 0.06
PFDN1O60925 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PFDN1O60925 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.43■□□□□ 0.06
PFDN1O60925 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PFDN1O60925 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.42■□□□□ 0.06
PFDN1O60925 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
PFDN1O60925 AC010141.2-201ENST00000452426 721 ntBASIC15.42■□□□□ 0.06
PFDN1O60925 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC15.42■□□□□ 0.06
PFDN1O60925 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN1O60925 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 AC067750.1-201ENST00000608826 6545 ntBASIC15.42■□□□□ 0.06
PFDN1O60925 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.42■□□□□ 0.06
PFDN1O60925 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PFDN1O60925 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PFDN1O60925 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC15.42■□□□□ 0.06
PFDN1O60925 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
PFDN1O60925 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN1O60925 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
PFDN1O60925 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
PFDN1O60925 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 AC079140.4-201ENST00000507448 529 ntBASIC15.41■□□□□ 0.06
PFDN1O60925 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN1O60925 CPT2-209ENST00000636935 803 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
PFDN1O60925 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN1O60925 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
PFDN1O60925 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC15.41■□□□□ 0.06
PFDN1O60925 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.4■□□□□ 0.06
PFDN1O60925 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 AC117489.1-201ENST00000625169 3217 ntBASIC15.4■□□□□ 0.06
PFDN1O60925 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
PFDN1O60925 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN1O60925 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 PTMA-205ENST00000410064 814 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 CREM-229ENST00000474362 1030 ntTSL 2 BASIC15.4■□□□□ 0.06
PFDN1O60925 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.4■□□□□ 0.06
PFDN1O60925 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 AC233992.3-201ENST00000607491 485 ntBASIC15.4■□□□□ 0.06
PFDN1O60925 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
PFDN1O60925 LINC00528-201ENST00000600723 2160 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms