Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC011676.5-201ENST00000624864 2660 ntBASIC16.2■□□□□ 0.18
HCN1O60741 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HCN1O60741 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.19■□□□□ 0.18
HCN1O60741 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HCN1O60741 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
HCN1O60741 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HCN1O60741 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.19■□□□□ 0.18
HCN1O60741 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 RCN1P2-201ENST00000398357 915 ntBASIC16.19■□□□□ 0.18
HCN1O60741 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.19■□□□□ 0.18
HCN1O60741 AP002469.2-201ENST00000531724 424 ntBASIC16.19■□□□□ 0.18
HCN1O60741 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.19■□□□□ 0.18
HCN1O60741 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.19■□□□□ 0.18
HCN1O60741 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 AC064862.7-201ENST00000604520 867 ntBASIC16.19■□□□□ 0.18
HCN1O60741 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HCN1O60741 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 HLA-J-201ENST00000462773 1622 ntBASIC16.19■□□□□ 0.18
HCN1O60741 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.19■□□□□ 0.18
HCN1O60741 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HCN1O60741 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 LINC00304-203ENST00000565008 1864 ntBASIC16.18■□□□□ 0.18
HCN1O60741 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HCN1O60741 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HCN1O60741 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HCN1O60741 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.18■□□□□ 0.18
HCN1O60741 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.18■□□□□ 0.18
HCN1O60741 AC106795.1-205ENST00000512851 1056 ntBASIC16.18■□□□□ 0.18
HCN1O60741 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.18■□□□□ 0.18
HCN1O60741 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.18■□□□□ 0.18
HCN1O60741 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.18■□□□□ 0.18
HCN1O60741 AC011467.2-201ENST00000598425 242 ntBASIC16.18■□□□□ 0.18
HCN1O60741 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.18■□□□□ 0.18
HCN1O60741 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 AL121761.2-201ENST00000598007 1648 ntBASIC16.18■□□□□ 0.18
HCN1O60741 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.18■□□□□ 0.18
HCN1O60741 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
HCN1O60741 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.18■□□□□ 0.18
HCN1O60741 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HCN1O60741 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.17■□□□□ 0.18
HCN1O60741 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.17■□□□□ 0.18
HCN1O60741 AC132008.2-207ENST00000454517 770 ntBASIC16.17■□□□□ 0.18
HCN1O60741 AC009078.2-202ENST00000463353 338 ntBASIC16.17■□□□□ 0.18
HCN1O60741 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
HCN1O60741 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.17■□□□□ 0.18
HCN1O60741 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HCN1O60741 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms