Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PLOD3O60568 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.32■□□□□ 0.2
PLOD3O60568 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.32■□□□□ 0.2
PLOD3O60568 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.32■□□□□ 0.2
PLOD3O60568 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PLOD3O60568 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.32■□□□□ 0.2
PLOD3O60568 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.32■□□□□ 0.2
PLOD3O60568 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.32■□□□□ 0.2
PLOD3O60568 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PLOD3O60568 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PLOD3O60568 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.32■□□□□ 0.2
PLOD3O60568 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 AC046185.3-201ENST00000623228 1824 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 AC132938.5-201ENST00000624980 1813 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 PMPCAP1-201ENST00000508114 1576 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 AC003669.1-201ENST00000334569 611 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.31■□□□□ 0.2
PLOD3O60568 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.31■□□□□ 0.2
PLOD3O60568 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.31■□□□□ 0.2
PLOD3O60568 MIR3652-201ENST00000579335 131 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.31■□□□□ 0.2
PLOD3O60568 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PLOD3O60568 AC108860.2-201ENST00000562760 2183 ntBASIC16.31■□□□□ 0.2
PLOD3O60568 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PLOD3O60568 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.31■□□□□ 0.2
PLOD3O60568 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PLOD3O60568 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PLOD3O60568 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PLOD3O60568 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
PLOD3O60568 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.3■□□□□ 0.2
PLOD3O60568 NUS1P2-201ENST00000417358 873 ntBASIC16.3■□□□□ 0.2
PLOD3O60568 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PLOD3O60568 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.3■□□□□ 0.2
PLOD3O60568 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.3■□□□□ 0.2
PLOD3O60568 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.3■□□□□ 0.2
PLOD3O60568 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.3■□□□□ 0.2
PLOD3O60568 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.3■□□□□ 0.2
PLOD3O60568 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PLOD3O60568 AC073592.5-201ENST00000624854 528 ntBASIC16.3■□□□□ 0.2
PLOD3O60568 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.3■□□□□ 0.2
PLOD3O60568 AP000867.4-201ENST00000641616 219 ntBASIC16.3■□□□□ 0.2
PLOD3O60568 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms