Protein–RNA interactions for Protein: O60479

DLX3, Homeobox protein DLX-3, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DLX3O60479 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.95■□□□□ 0.3
DLX3O60479 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.95■□□□□ 0.3
DLX3O60479 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 FRMD8P1-201ENST00000440433 1524 ntBASIC16.95■□□□□ 0.3
DLX3O60479 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
DLX3O60479 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
DLX3O60479 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.95■□□□□ 0.3
DLX3O60479 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
DLX3O60479 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 DOC2GP-204ENST00000639052 2548 ntBASIC16.94■□□□□ 0.3
DLX3O60479 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.94■□□□□ 0.3
DLX3O60479 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.94■□□□□ 0.3
DLX3O60479 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.94■□□□□ 0.3
DLX3O60479 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.94■□□□□ 0.3
DLX3O60479 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.94■□□□□ 0.3
DLX3O60479 DUX4L26-201ENST00000489078 1255 ntBASIC16.94■□□□□ 0.3
DLX3O60479 STK19B-204ENST00000512515 211 ntBASIC16.94■□□□□ 0.3
DLX3O60479 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.94■□□□□ 0.3
DLX3O60479 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.94■□□□□ 0.3
DLX3O60479 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
DLX3O60479 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.94■□□□□ 0.3
DLX3O60479 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
DLX3O60479 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
DLX3O60479 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 AC132938.5-201ENST00000624980 1813 ntBASIC16.93■□□□□ 0.3
DLX3O60479 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.93■□□□□ 0.3
DLX3O60479 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
DLX3O60479 KRT8P26-201ENST00000534154 1276 ntBASIC16.93■□□□□ 0.3
DLX3O60479 AL136038.3-201ENST00000561909 1096 ntBASIC16.93■□□□□ 0.3
DLX3O60479 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
DLX3O60479 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
DLX3O60479 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
DLX3O60479 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
DLX3O60479 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
DLX3O60479 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DLX3O60479 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.92■□□□□ 0.3
DLX3O60479 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
DLX3O60479 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
DLX3O60479 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
DLX3O60479 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.92■□□□□ 0.3
DLX3O60479 AC079328.2-201ENST00000561241 3354 ntBASIC16.92■□□□□ 0.3
DLX3O60479 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.92■□□□□ 0.3
DLX3O60479 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.92■□□□□ 0.3
DLX3O60479 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms