Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.27■□□□□ 0.35
LDB2O43679 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC17.27■□□□□ 0.35
LDB2O43679 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.27■□□□□ 0.35
LDB2O43679 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
LDB2O43679 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 GPR89P-201ENST00000407924 1495 ntBASIC17.26■□□□□ 0.35
LDB2O43679 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.26■□□□□ 0.35
LDB2O43679 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.26■□□□□ 0.35
LDB2O43679 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 LINC01711-201ENST00000598340 967 ntBASIC17.26■□□□□ 0.35
LDB2O43679 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 AC009053.2-201ENST00000563701 2365 ntBASIC17.26■□□□□ 0.35
LDB2O43679 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 FRMD8P1-201ENST00000440433 1524 ntBASIC17.26■□□□□ 0.35
LDB2O43679 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.26■□□□□ 0.35
LDB2O43679 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
LDB2O43679 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LDB2O43679 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.25■□□□□ 0.35
LDB2O43679 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
LDB2O43679 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LDB2O43679 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LDB2O43679 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.25■□□□□ 0.35
LDB2O43679 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.24■□□□□ 0.35
LDB2O43679 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LDB2O43679 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
LDB2O43679 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.24■□□□□ 0.35
LDB2O43679 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.24■□□□□ 0.35
LDB2O43679 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
LDB2O43679 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.24■□□□□ 0.35
LDB2O43679 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
LDB2O43679 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.24■□□□□ 0.35
LDB2O43679 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
LDB2O43679 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.24■□□□□ 0.35
LDB2O43679 AL353135.1-201ENST00000606729 504 ntBASIC17.24■□□□□ 0.35
LDB2O43679 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.24■□□□□ 0.35
LDB2O43679 AC092068.3-201ENST00000587894 2016 ntBASIC17.24■□□□□ 0.35
LDB2O43679 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.24■□□□□ 0.35
LDB2O43679 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC17.24■□□□□ 0.35
LDB2O43679 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LDB2O43679 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.23■□□□□ 0.35
LDB2O43679 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.23■□□□□ 0.35
LDB2O43679 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.23■□□□□ 0.35
LDB2O43679 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LDB2O43679 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms