Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RNF13O43567 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.76■□□□□ 0.11
RNF13O43567 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
RNF13O43567 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RNF13O43567 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.76■□□□□ 0.11
RNF13O43567 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 AL845331.1-201ENST00000424978 1190 ntBASIC15.76■□□□□ 0.11
RNF13O43567 AC246785.2-201ENST00000432512 513 ntBASIC15.76■□□□□ 0.11
RNF13O43567 TSSC2-201ENST00000450217 709 ntBASIC15.76■□□□□ 0.11
RNF13O43567 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.76■□□□□ 0.11
RNF13O43567 AC005336.2-201ENST00000593183 939 ntBASIC15.76■□□□□ 0.11
RNF13O43567 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RNF13O43567 AL138831.2-201ENST00000606564 490 ntBASIC15.76■□□□□ 0.11
RNF13O43567 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
RNF13O43567 AL139327.4-201ENST00000612362 153 ntBASIC15.76■□□□□ 0.11
RNF13O43567 AC116407.4-201ENST00000623319 1061 ntBASIC15.76■□□□□ 0.11
RNF13O43567 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 PCDHA14-201ENST00000506751 2298 ntBASIC15.76■□□□□ 0.11
RNF13O43567 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RNF13O43567 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.76■□□□□ 0.11
RNF13O43567 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF13O43567 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 MYCLP1-201ENST00000372451 1075 ntBASIC15.75■□□□□ 0.11
RNF13O43567 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
RNF13O43567 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.75■□□□□ 0.11
RNF13O43567 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF13O43567 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF13O43567 AC109462.3-201ENST00000573934 613 ntBASIC15.75■□□□□ 0.11
RNF13O43567 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.75■□□□□ 0.11
RNF13O43567 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.75■□□□□ 0.11
RNF13O43567 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 AC016396.2-201ENST00000562575 1417 ntBASIC15.75■□□□□ 0.11
RNF13O43567 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
RNF13O43567 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC15.75■□□□□ 0.11
RNF13O43567 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.75■□□□□ 0.11
RNF13O43567 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF13O43567 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
RNF13O43567 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF13O43567 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.74■□□□□ 0.11
RNF13O43567 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.74■□□□□ 0.11
RNF13O43567 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RNF13O43567 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms