Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.3■□□□□ 0.2
SPTBN2O15020 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.3■□□□□ 0.2
SPTBN2O15020 AL023806.1-201ENST00000603994 1649 ntBASIC16.3■□□□□ 0.2
SPTBN2O15020 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SPTBN2O15020 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.3■□□□□ 0.2
SPTBN2O15020 HLA-V-204ENST00000476601 1289 ntBASIC16.3■□□□□ 0.2
SPTBN2O15020 SLC25A6P2-201ENST00000497974 877 ntBASIC16.3■□□□□ 0.2
SPTBN2O15020 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 AC107918.2-201ENST00000530817 355 ntBASIC16.3■□□□□ 0.2
SPTBN2O15020 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.3■□□□□ 0.2
SPTBN2O15020 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPTBN2O15020 AP3S2-216ENST00000617003 1561 ntBASIC16.3■□□□□ 0.2
SPTBN2O15020 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPTBN2O15020 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPTBN2O15020 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTBN2O15020 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.29■□□□□ 0.2
SPTBN2O15020 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTBN2O15020 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.29■□□□□ 0.2
SPTBN2O15020 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SPTBN2O15020 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SPTBN2O15020 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTBN2O15020 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC16.29■□□□□ 0.2
SPTBN2O15020 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPTBN2O15020 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPTBN2O15020 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC16.29■□□□□ 0.2
SPTBN2O15020 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 AL161645.1-201ENST00000622716 1255 ntBASIC16.29■□□□□ 0.2
SPTBN2O15020 AC007431.3-201ENST00000623221 587 ntBASIC16.29■□□□□ 0.2
SPTBN2O15020 AC008267.7-201ENST00000624570 1194 ntBASIC16.29■□□□□ 0.2
SPTBN2O15020 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTBN2O15020 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.29■□□□□ 0.2
SPTBN2O15020 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPTBN2O15020 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SPTBN2O15020 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC16.28■□□□□ 0.2
SPTBN2O15020 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
SPTBN2O15020 ZNF767P-206ENST00000513792 565 ntBASIC16.28■□□□□ 0.2
SPTBN2O15020 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SPTBN2O15020 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 BTBD7P1-201ENST00000447253 1453 ntBASIC16.28■□□□□ 0.2
SPTBN2O15020 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SPTBN2O15020 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SPTBN2O15020 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.28■□□□□ 0.2
SPTBN2O15020 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SPTBN2O15020 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SPTBN2O15020 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms