Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 AC126177.1-201ENST00000547829 2218 ntBASIC16.45■□□□□ 0.22
CASQ2O14958 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.45■□□□□ 0.22
CASQ2O14958 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CASQ2O14958 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.45■□□□□ 0.22
CASQ2O14958 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.44■□□□□ 0.22
CASQ2O14958 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.44■□□□□ 0.22
CASQ2O14958 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CASQ2O14958 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.44■□□□□ 0.22
CASQ2O14958 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.44■□□□□ 0.22
CASQ2O14958 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
CASQ2O14958 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.44■□□□□ 0.22
CASQ2O14958 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 AC093525.9-201ENST00000624961 1746 ntBASIC16.44■□□□□ 0.22
CASQ2O14958 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.44■□□□□ 0.22
CASQ2O14958 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.44■□□□□ 0.22
CASQ2O14958 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CASQ2O14958 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CASQ2O14958 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.43■□□□□ 0.22
CASQ2O14958 AC124947.2-201ENST00000547118 1133 ntBASIC16.43■□□□□ 0.22
CASQ2O14958 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.43■□□□□ 0.22
CASQ2O14958 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.43■□□□□ 0.22
CASQ2O14958 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.43■□□□□ 0.22
CASQ2O14958 MIR6821-201ENST00000617625 74 ntBASIC16.43■□□□□ 0.22
CASQ2O14958 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC16.43■□□□□ 0.22
CASQ2O14958 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CASQ2O14958 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.43■□□□□ 0.22
CASQ2O14958 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CASQ2O14958 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASQ2O14958 AC092364.2-201ENST00000596710 2692 ntBASIC16.42■□□□□ 0.22
CASQ2O14958 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASQ2O14958 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CASQ2O14958 AC099063.4-201ENST00000641099 1602 ntBASIC16.42■□□□□ 0.22
CASQ2O14958 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms