Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL21O00585 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.15■□□□□ 0.02
CCL21O00585 AL512356.2-201ENST00000546955 174 ntBASIC15.15■□□□□ 0.02
CCL21O00585 AC051619.7-201ENST00000568314 623 ntBASIC15.15■□□□□ 0.02
CCL21O00585 MIR4515-201ENST00000584082 81 ntBASIC15.15■□□□□ 0.02
CCL21O00585 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL21O00585 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL21O00585 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.15■□□□□ 0.02
CCL21O00585 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
CCL21O00585 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CCL21O00585 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CCL21O00585 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL21O00585 AC063926.2-201ENST00000623766 1308 ntBASIC15.15■□□□□ 0.02
CCL21O00585 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CCL21O00585 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 UXT-AS1-201ENST00000590504 1525 ntBASIC15.14■□□□□ 0.01
CCL21O00585 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL21O00585 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL21O00585 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 IGHV3-42-201ENST00000520410 361 ntBASIC15.14■□□□□ 0.01
CCL21O00585 POLD4-211ENST00000539074 714 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL21O00585 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL21O00585 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL21O00585 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.14■□□□□ 0.01
CCL21O00585 AL139327.4-201ENST00000612362 153 ntBASIC15.14■□□□□ 0.01
CCL21O00585 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.14■□□□□ 0.01
CCL21O00585 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.14■□□□□ 0.01
CCL21O00585 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.14■□□□□ 0.01
CCL21O00585 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CCL21O00585 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL21O00585 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
CCL21O00585 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
CCL21O00585 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL21O00585 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL21O00585 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL21O00585 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 AC107918.2-201ENST00000530817 355 ntBASIC15.13■□□□□ 0.01
CCL21O00585 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 AC087641.1-201ENST00000557561 1021 ntBASIC15.13■□□□□ 0.01
CCL21O00585 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL21O00585 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL21O00585 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CCL21O00585 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.13■□□□□ 0.01
CCL21O00585 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.13■□□□□ 0.01
CCL21O00585 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CCL21O00585 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CCL21O00585 FLJ13224-201ENST00000313737 1514 ntBASIC15.12■□□□□ 0.01
CCL21O00585 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms