Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR4O00206 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.12■□□□□ 0.33
TLR4O00206 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TLR4O00206 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TLR4O00206 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
TLR4O00206 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 HMGN1P19-201ENST00000436976 333 ntBASIC17.11■□□□□ 0.33
TLR4O00206 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TLR4O00206 OR7E47P-204ENST00000575924 449 ntBASIC17.11■□□□□ 0.33
TLR4O00206 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.11■□□□□ 0.33
TLR4O00206 AL078644.1-201ENST00000609881 752 ntBASIC17.11■□□□□ 0.33
TLR4O00206 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 AC010507.1-201ENST00000633895 436 ntBASIC17.11■□□□□ 0.33
TLR4O00206 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TLR4O00206 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 BCAR1-209ENST00000546196 1340 ntBASIC17.11■□□□□ 0.33
TLR4O00206 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.11■□□□□ 0.33
TLR4O00206 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TLR4O00206 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.1■□□□□ 0.33
TLR4O00206 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.1■□□□□ 0.33
TLR4O00206 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 PDPK2P-202ENST00000562415 1191 ntBASIC17.1■□□□□ 0.33
TLR4O00206 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TLR4O00206 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 FLJ13224-201ENST00000313737 1514 ntBASIC17.1■□□□□ 0.33
TLR4O00206 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
TLR4O00206 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 PI4KAP1-204ENST00000612579 1703 ntBASIC17.1■□□□□ 0.33
TLR4O00206 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TLR4O00206 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TLR4O00206 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.09■□□□□ 0.33
TLR4O00206 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TLR4O00206 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.09■□□□□ 0.33
TLR4O00206 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.09■□□□□ 0.33
TLR4O00206 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TLR4O00206 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.09■□□□□ 0.33
TLR4O00206 ACTG1P4-201ENST00000425123 1122 ntBASIC17.09■□□□□ 0.33
TLR4O00206 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.09■□□□□ 0.33
TLR4O00206 RHOQP3-201ENST00000437982 621 ntBASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms