Protein–RNA interactions for Protein: J3QQQ9

Uncharacterized protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
J3QQQ9 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
J3QQQ9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
J3QQQ9 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
J3QQQ9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 PPP1R14BP2-201ENST00000426284 444 ntBASIC11.93□□□□□ -0.5
J3QQQ9 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC11.93□□□□□ -0.5
J3QQQ9 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC11.93□□□□□ -0.5
J3QQQ9 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 MIR4758-201ENST00000577688 71 ntBASIC11.93□□□□□ -0.5
J3QQQ9 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 AC008687.5-201ENST00000593746 558 ntBASIC11.93□□□□□ -0.5
J3QQQ9 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 AC092384.3-202ENST00000564646 2873 ntBASIC11.93□□□□□ -0.5
J3QQQ9 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC11.93□□□□□ -0.5
J3QQQ9 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.93□□□□□ -0.5
J3QQQ9 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
J3QQQ9 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
J3QQQ9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
J3QQQ9 MIR3180-4-201ENST00000582223 153 ntBASIC11.92□□□□□ -0.5
J3QQQ9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
J3QQQ9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.92□□□□□ -0.5
J3QQQ9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
J3QQQ9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
J3QQQ9 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
J3QQQ9 ING5-213ENST00000636051 4199 ntTSL 5 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms