Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CCDC188H7C350 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
CCDC188H7C350 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 LINC02199-201ENST00000506655 2702 ntBASIC17.98■□□□□ 0.47
CCDC188H7C350 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 AP002490.2-201ENST00000524791 560 ntBASIC17.98■□□□□ 0.47
CCDC188H7C350 MIR4497-201ENST00000583208 89 ntBASIC17.98■□□□□ 0.47
CCDC188H7C350 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 AC022188.1-201ENST00000620960 1664 ntBASIC17.98■□□□□ 0.47
CCDC188H7C350 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CCDC188H7C350 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.98■□□□□ 0.47
CCDC188H7C350 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CCDC188H7C350 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC188H7C350 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CCDC188H7C350 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.97■□□□□ 0.47
CCDC188H7C350 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC188H7C350 AC007967.3-201ENST00000434308 558 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 AC122714.2-201ENST00000502787 707 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 AC111152.3-201ENST00000569699 673 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.97■□□□□ 0.47
CCDC188H7C350 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CCDC188H7C350 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
CCDC188H7C350 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 FRMD8P1-201ENST00000440433 1524 ntBASIC17.97■□□□□ 0.47
CCDC188H7C350 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.97■□□□□ 0.47
CCDC188H7C350 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CCDC188H7C350 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
CCDC188H7C350 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
CCDC188H7C350 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC188H7C350 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.96■□□□□ 0.47
CCDC188H7C350 AL441883.1-201ENST00000566170 1045 ntBASIC17.96■□□□□ 0.47
CCDC188H7C350 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC188H7C350 AP006294.2-201ENST00000641667 209 ntBASIC17.96■□□□□ 0.47
CCDC188H7C350 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.96■□□□□ 0.47
CCDC188H7C350 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC188H7C350 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CCDC188H7C350 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
CCDC188H7C350 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC188H7C350 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC188H7C350 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC188H7C350 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.96■□□□□ 0.46
CCDC188H7C350 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC188H7C350 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC188H7C350 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC188H7C350 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms