Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 MFSD11-216ENST00000590393 1141 ntBASIC16.98■□□□□ 0.31
VGLL3A8MV65 AC120498.10-201ENST00000621827 505 ntBASIC16.98■□□□□ 0.31
VGLL3A8MV65 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.98■□□□□ 0.31
VGLL3A8MV65 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VGLL3A8MV65 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.98■□□□□ 0.31
VGLL3A8MV65 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
VGLL3A8MV65 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
VGLL3A8MV65 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 INVS-201ENST00000262456 2968 ntTSL 5 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 RAP2CP1-201ENST00000605103 478 ntBASIC16.97■□□□□ 0.31
VGLL3A8MV65 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 AC073111.5-205ENST00000641717 521 ntBASIC16.97■□□□□ 0.31
VGLL3A8MV65 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.97■□□□□ 0.31
VGLL3A8MV65 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VGLL3A8MV65 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.97■□□□□ 0.31
VGLL3A8MV65 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 NAA20-201ENST00000310450 920 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 CDCA4P2-201ENST00000441182 718 ntBASIC16.96■□□□□ 0.31
VGLL3A8MV65 AL355312.1-201ENST00000407115 2176 ntBASIC16.96■□□□□ 0.31
VGLL3A8MV65 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.96■□□□□ 0.31
VGLL3A8MV65 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VGLL3A8MV65 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VGLL3A8MV65 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VGLL3A8MV65 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.96■□□□□ 0.3
VGLL3A8MV65 KRT16P2-201ENST00000414673 1423 ntBASIC16.96■□□□□ 0.3
VGLL3A8MV65 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VGLL3A8MV65 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VGLL3A8MV65 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms