Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MIR6775-201ENST00000617557 69 ntBASIC21.53■■□□□ 1.04
RGPD3A6NKT7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC21.53■■□□□ 1.04
RGPD3A6NKT7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 AC114501.2-201ENST00000439631 535 ntBASIC21.52■■□□□ 1.04
RGPD3A6NKT7 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 MIR4538-201ENST00000581377 78 ntBASIC21.52■■□□□ 1.04
RGPD3A6NKT7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
RGPD3A6NKT7 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 RN7SL618P-201ENST00000477850 296 ntBASIC21.51■■□□□ 1.03
RGPD3A6NKT7 AC099548.2-209ENST00000480264 625 ntBASIC21.51■■□□□ 1.03
RGPD3A6NKT7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 BOLA2P3-201ENST00000404566 256 ntBASIC21.51■■□□□ 1.03
RGPD3A6NKT7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 TECR-220ENST00000600083 1204 ntTSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
RGPD3A6NKT7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 ELK1P1-201ENST00000485699 580 ntBASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 DOC2GP-202ENST00000514950 1163 ntBASIC21.5■■□□□ 1.03
RGPD3A6NKT7 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 MIR4492-201ENST00000581627 80 ntBASIC21.5■■□□□ 1.03
RGPD3A6NKT7 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.5■■□□□ 1.03
RGPD3A6NKT7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RGPD3A6NKT7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 AC015936.2-201ENST00000593177 259 ntBASIC21.49■■□□□ 1.03
RGPD3A6NKT7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 AC020907.1-201ENST00000616460 1350 ntBASIC21.49■■□□□ 1.03
RGPD3A6NKT7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC21.49■■□□□ 1.03
RGPD3A6NKT7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms