Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PALM3A6NDB9 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PALM3A6NDB9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
PALM3A6NDB9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.89■□□□□ 0.77
PALM3A6NDB9 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PALM3A6NDB9 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 AL023806.1-201ENST00000603994 1649 ntBASIC19.88■□□□□ 0.77
PALM3A6NDB9 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 HCG4B-203ENST00000450128 991 ntBASIC19.88■□□□□ 0.77
PALM3A6NDB9 AC087163.2-201ENST00000457299 853 ntBASIC19.88■□□□□ 0.77
PALM3A6NDB9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 AC010654.1-201ENST00000615722 808 ntBASIC19.88■□□□□ 0.77
PALM3A6NDB9 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
PALM3A6NDB9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PALM3A6NDB9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC19.87■□□□□ 0.77
PALM3A6NDB9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 CRYGEP-201ENST00000412192 528 ntBASIC19.87■□□□□ 0.77
PALM3A6NDB9 IGLL3P-201ENST00000412472 434 ntBASIC19.87■□□□□ 0.77
PALM3A6NDB9 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 AL591424.1-201ENST00000442569 1213 ntBASIC19.87■□□□□ 0.77
PALM3A6NDB9 KRT18P2-201ENST00000447938 1258 ntBASIC19.87■□□□□ 0.77
PALM3A6NDB9 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PALM3A6NDB9 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC19.87■□□□□ 0.77
PALM3A6NDB9 FRMD8P1-201ENST00000440433 1524 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 AC108860.2-201ENST00000562760 2183 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 AC007967.2-201ENST00000432613 625 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 POLD2P1-201ENST00000511220 997 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 PGAM5P1-201ENST00000518923 814 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 DUX4L17-201ENST00000557360 1267 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 MIR4751-201ENST00000578027 74 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 AC064836.3-201ENST00000607928 673 ntBASIC19.86■□□□□ 0.77
PALM3A6NDB9 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.86■□□□□ 0.77
PALM3A6NDB9 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PALM3A6NDB9 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
PALM3A6NDB9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.85■□□□□ 0.77
PALM3A6NDB9 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PALM3A6NDB9 AC002310.6-201ENST00000624451 1377 ntBASIC19.85■□□□□ 0.77
PALM3A6NDB9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PALM3A6NDB9 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.85■□□□□ 0.77
PALM3A6NDB9 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PALM3A6NDB9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.85■□□□□ 0.77
PALM3A6NDB9 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms