Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
SHISA3A0PJX4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 AC144831.1-201ENST00000573312 2656 ntBASIC15.07■□□□□ 0
SHISA3A0PJX4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 MIR1238-201ENST00000408483 83 ntBASIC15.07■□□□□ 0
SHISA3A0PJX4 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.07■□□□□ 0
SHISA3A0PJX4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 C2orf69P3-201ENST00000565542 1120 ntBASIC15.07■□□□□ 0
SHISA3A0PJX4 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC15.07■□□□□ 0
SHISA3A0PJX4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.07■□□□□ 0
SHISA3A0PJX4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
SHISA3A0PJX4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.07■□□□□ 0
SHISA3A0PJX4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SHISA3A0PJX4 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 AC005052.1-201ENST00000625181 2492 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 DBET-201ENST00000630918 3363 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.06■□□□□ 0
SHISA3A0PJX4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC15.06■□□□□ 0
SHISA3A0PJX4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 COX5BP2-201ENST00000392354 334 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.06■□□□□ 0
SHISA3A0PJX4 GCSHP5-201ENST00000443090 522 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 AL158047.1-201ENST00000445918 881 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 MTCL1P1-201ENST00000446207 792 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 AC098590.1-201ENST00000468126 897 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SHISA3A0PJX4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
SHISA3A0PJX4 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.06■□□□□ 0
SHISA3A0PJX4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.06■□□□□ 0
SHISA3A0PJX4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.06■□□□□ 0
SHISA3A0PJX4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SHISA3A0PJX4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
SHISA3A0PJX4 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.05■□□□□ 0
SHISA3A0PJX4 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ 0
SHISA3A0PJX4 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
SHISA3A0PJX4 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC15.05■□□□□ -0
SHISA3A0PJX4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.05■□□□□ -0
SHISA3A0PJX4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.05■□□□□ -0
SHISA3A0PJX4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
SHISA3A0PJX4 AC093827.2-201ENST00000512654 315 ntBASIC15.05■□□□□ -0
SHISA3A0PJX4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.05■□□□□ -0
SHISA3A0PJX4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
SHISA3A0PJX4 EGLN1P1-201ENST00000531623 762 ntBASIC15.05■□□□□ -0
SHISA3A0PJX4 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
SHISA3A0PJX4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms