Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRBV9S1A1TA0A576 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AC104076.2-201ENST00000448912 469 ntBASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AL671277.2-201ENST00000458060 996 ntBASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 FRMD8P1-201ENST00000440433 1524 ntBASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AC009336.1-201ENST00000608941 1553 ntBASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRBV9S1A1TA0A576 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
TCRBV9S1A1TA0A576 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.39■□□□□ 0.38
TCRBV9S1A1TA0A576 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCRBV9S1A1TA0A576 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCRBV9S1A1TA0A576 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCRBV9S1A1TA0A576 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 AC090616.6-201ENST00000582640 721 ntBASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCRBV9S1A1TA0A576 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.38■□□□□ 0.37
TCRBV9S1A1TA0A576 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms