Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 AC003669.1-201ENST00000334569 611 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 SIGLEC30P-201ENST00000455569 941 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 MIR4469-201ENST00000583919 79 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 LINC02084-201ENST00000606069 1096 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AL596442.2-201ENST00000610240 980 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 AC012317.2-201ENST00000623305 2251 ntBASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.18■□□□□ 0.18
PCDHGA9Q9Y5G4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 AL049757.1-201ENST00000616842 1596 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 KLF4P1-201ENST00000412782 1185 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 METTL21AP1-201ENST00000438852 635 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 HCG4B-203ENST00000450128 991 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 RPS15P9-201ENST00000494093 319 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 AL645608.8-201ENST00000606034 2086 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 AC132938.5-201ENST00000624980 1813 ntBASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGA9Q9Y5G4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 ALG1L5P-201ENST00000482043 771 ntBASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGA9Q9Y5G4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms